Experience

 
 
 
 
 
February 2019 – Present
Montpellier, France

Research Engineer

CNRS

Providing support for researchers in applied mathematics regarding:

  • mathematical engnineering
  • software development
  • high performance computing
 
 
 
 
 
February 2017 – January 2019
Grenoble, France

Research Engineer

Inria

Engineering and research work in machine learning
 
 
 
 
 
October 2013 – January 2017
Lyon, France

PhD

LBBE

PhD in computational statistics applied to genomic data analysis

Development

R

Python

C/C++

Projects

On-going projects, more to come.

Software

More details are available here.

Python package for haplotype phasing and local ancestry inference

Probabilistic count matrix factorization for single cell transcriptomic data analyses (dimension reduction, visualization).

Optimization toolbox for sparse estimation, implementing algorithms that solve machine learning and signal processing problems involving sparse regularizations.

Supervised methods for dimension reduction in classification and regression framework (in particular PLS-based routines for genomic data analyses).

Re-implementation of Convolutional Kernel Network (CKN) from Mairal (2016) in Python based on the TensorFlow framework